- Click My Files, and then select CAS Sequences.
- On the CAS Sequences page, click the New Search button.
- Click the Motif tab.
- Import (.txt files only) or enter the query sequence. See Motif Sequence Searching - Symbols and Codes for tips in crafting your sequence.
Note: If importing a sequence, the .txt file's name replaces the auto-generated text in the Name field. -
Select the desired search options:
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Sequence type
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Combine Motif Results: This option is selected by default; produces a single, unified set of results with no child (derivative) queries.
Advanced Sequence Search offers options to focus the search by Query Coverage % and E-Value.
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Click the Run Search button. Note: If the imported or entered sequence is in an invalid format or contains invalid characters, an error message displays.
You will then see your search is in progress; when complete, click the View Results button.